HL_7NSI_048
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- GUGAAGAGGC
- Length
- 10 nucleotides
- Bulged bases
- 7NSI|1|BA|A|1025, 7NSI|1|BA|A|1026, 7NSI|1|BA|G|1027
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NSI_048 not in the Motif Atlas
- Homologous match to HL_4WF9_047
- Geometric discrepancy: 0.1609
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.2
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7NSI|1|BA|G|1022
7NSI|1|BA|U|1023
7NSI|1|BA|G|1024
7NSI|1|BA|A|1025
7NSI|1|BA|A|1026
7NSI|1|BA|G|1027
7NSI|1|BA|A|1028
7NSI|1|BA|G|1029
7NSI|1|BA|G|1030
7NSI|1|BA|C|1031
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain B5
- bL32m
- Chain BE
- ICT1
- Chain BV
- 39S ribosomal protein L21, mitochondrial isoform d
- Chain Bt
- Mitochondrial ribosomal protein L57
- Chain Bx
- Mitochondrial ribosomal protein S18A
Coloring options: