HL_7NSI_058

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

AGCAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSI_058 not in the Motif Atlas

Homologous match to HL_7RQB_063

Geometric discrepancy: 0.1467

The information below is about HL_7RQB_063

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

7NSI|1|BA|A|1417
7NSI|1|BA|G|1418
7NSI|1|BA|C|1419
7NSI|1|BA|A|1420
7NSI|1|BA|A|1421
7NSI|1|BA|U|1422

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BD

Ribosomal_L2_C domain-containing protein

Chain BG

Ribosome-recycling factor, mitochondrial