HL_7NSO_020

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUAGG

Length

6 nucleotides

Bulged bases

7NSO|1|A|U|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSO_020 not in the Motif Atlas

Geometric match to HL_4PMI_004

Geometric discrepancy: 0.1472

The information below is about HL_4PMI_004

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7NSO|1|A|C|544
7NSO|1|A|U|545
7NSO|1|A|U|546
7NSO|1|A|A|547
7NSO|1|A|G|548
7NSO|1|A|G|549

Current chains

Chain A

23S rRNA (2903-MER)

Nearby chains

Chain J

50S ribosomal protein L13

Chain R

50S ribosomal protein L21