HL_7NSO_087

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7NSO|1|a|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSO_087 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2177

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7NSO|1|a|G|462
7NSO|1|a|U|463
7NSO|1|a|U|464
7NSO|1|a|A|465
7NSO|1|a|A|466
7NSO|1|a|U|467
7NSO|1|a|A|468
7NSO|1|a|C|469
7NSO|1|a|C|470

Current chains

Chain a

16S rRNA (1540-MER)

Nearby chains