HL_7NSP_020

3D structure

PDB id

7NSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUUAGG

Length

6 nucleotides

Bulged bases

7NSP|1|A|U|546

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSP_020 not in the Motif Atlas

Geometric match to HL_1I6U_001

Geometric discrepancy: 0.1919

The information below is about HL_1I6U_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

7NSP|1|A|C|544
7NSP|1|A|U|545
7NSP|1|A|U|546
7NSP|1|A|A|547
7NSP|1|A|G|548
7NSP|1|A|G|549

Current chains

Chain A

23S rRNA

Nearby chains

Chain J

50S ribosomal protein L13

Chain R

50S ribosomal protein L21