HL_7NSP_032

3D structure

PDB id

7NSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUAGAAGCA

Length

9 nucleotides

Bulged bases

7NSP|1|A|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSP_032 not in the Motif Atlas

Geometric match to HL_4V9F_036

Geometric discrepancy: 0.3705

The information below is about HL_4V9F_036

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

7NSP|1|A|U|1065
7NSP|1|A|U|1066
7NSP|1|A|A|1067
7NSP|1|A|G|1068
7NSP|1|A|A|1069
7NSP|1|A|A|1070
7NSP|1|A|G|1071
7NSP|1|A|C|1072
7NSP|1|A|A|1073

Current chains

Chain A

23S rRNA

Nearby chains