3D structure

PDB id
7NSP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GUGAAGAUGC
Length
10 nucleotides
Bulged bases
7NSP|1|A|A|2030, 7NSP|1|A|A|2031, 7NSP|1|A|G|2032
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7NSP_054 not in the Motif Atlas
Homologous match to HL_4WF9_047
Geometric discrepancy: 0.1537
The information below is about HL_4WF9_047
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_78372.1
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
10

Unit IDs

7NSP|1|A|G|2027
7NSP|1|A|U|2028
7NSP|1|A|G|2029
7NSP|1|A|A|2030
7NSP|1|A|A|2031
7NSP|1|A|G|2032
7NSP|1|A|A|2033
7NSP|1|A|U|2034
7NSP|1|A|G|2035
7NSP|1|A|C|2036

Current chains

Chain A
23S rRNA

Nearby chains

Chain 0
50S ribosomal protein L32
Chain D
50S ribosomal protein L3
Chain R
50S ribosomal protein L21

Coloring options:


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