HL_7NSQ_017

3D structure

PDB id

7NSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7NSQ|1|A|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSQ_017 not in the Motif Atlas

Homologous match to HL_5J7L_146

Geometric discrepancy: 0.08

The information below is about HL_5J7L_146

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7NSQ|1|A|G|410
7NSQ|1|A|G|411
7NSQ|1|A|A|412
7NSQ|1|A|C|413
7NSQ|1|A|C|414
7NSQ|1|A|A|415
7NSQ|1|A|U|416
7NSQ|1|A|C|417

Current chains

Chain A

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15