HL_7NSQ_039

3D structure

PDB id

7NSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

7NSQ|1|A|U|1396, 7NSQ|1|A|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSQ_039 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.1044

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7NSQ|1|A|G|1389
7NSQ|1|A|U|1390
7NSQ|1|A|U|1391
7NSQ|1|A|A|1392
7NSQ|1|A|A|1393
7NSQ|1|A|U|1394
7NSQ|1|A|A|1395
7NSQ|1|A|U|1396
7NSQ|1|A|U|1397
7NSQ|1|A|C|1398

Current chains

Chain A

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23