HL_7NWH_026

3D structure

PDB id

7NWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GCCGAAACGAU

Length

11 nucleotides

Bulged bases

7NWH|1|5|C|1768

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWH|1|5|G|1761
7NWH|1|5|C|1762
7NWH|1|5|C|1763
7NWH|1|5|G|1764
7NWH|1|5|A|1765
7NWH|1|5|A|1766
7NWH|1|5|A|1767
7NWH|1|5|C|1768
7NWH|1|5|G|1769
7NWH|1|5|A|1770
7NWH|1|5|U|1771

Current chains

Chain 5

28S Ribosomal RNA

Nearby chains

Chain PP

40S ribosomal protein uS19