HL_7NWT_004

3D structure

PDB id

7NWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

7NWT|1|1|U|139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NWT_004 not in the Motif Atlas

Geometric match to HL_1UN6_003

Geometric discrepancy: 0.1415

The information below is about HL_1UN6_003

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

7NWT|1|1|U|137
7NWT|1|1|U|138
7NWT|1|1|U|139
7NWT|1|1|C|140
7NWT|1|1|G|141
7NWT|1|1|A|142

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain T

50S ribosomal protein L23