HL_7NWT_030

3D structure

PDB id

7NWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

7NWT|1|1|A|1175, 7NWT|1|1|U|1176

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NWT_030 not in the Motif Atlas

Geometric match to HL_4WF9_037

Geometric discrepancy: 0.3813

The information below is about HL_4WF9_037

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7NWT|1|1|C|1172
7NWT|1|1|U|1173
7NWT|1|1|U|1174
7NWT|1|1|A|1175
7NWT|1|1|U|1176
7NWT|1|1|G|1177

Current chains

Chain 1

23S ribosomal RNA

Nearby chains