HL_7NWT_036

3D structure

PDB id

7NWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CGACGGUUG

Length

9 nucleotides

Bulged bases

7NWT|1|1|A|1453, 7NWT|1|1|C|1454

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NWT_036 not in the Motif Atlas

Geometric match to HL_4L8H_001

Geometric discrepancy: 0.1537

The information below is about HL_4L8H_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

7NWT|1|1|C|1451
7NWT|1|1|G|1452
7NWT|1|1|A|1453
7NWT|1|1|C|1454
7NWT|1|1|G|1455
7NWT|1|1|G|1456
7NWT|1|1|U|1457
7NWT|1|1|U|1458
7NWT|1|1|G|1459

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain N

50S ribosomal protein L17