3D structure

PDB id
7NWW (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.05 Å

Loop

Sequence
G(PSU)GCUAACGU
Length
10 nucleotides
Bulged bases
7NWW|1|1|U|958, 7NWW|1|1|C|961
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7NWW_026 not in the Motif Atlas
Homologous match to HL_5J7L_159
Geometric discrepancy: 0.0701
The information below is about HL_5J7L_159
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NWW|1|1|G|954
7NWW|1|1|PSU|955
7NWW|1|1|G|956
7NWW|1|1|C|957
7NWW|1|1|U|958
7NWW|1|1|A|959
7NWW|1|1|A|960
7NWW|1|1|C|961
7NWW|1|1|G|962
7NWW|1|1|U|963

Current chains

Chain 1
23S rRNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L16

Coloring options:


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