HL_7NWW_042

3D structure

PDB id

7NWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7NWW|1|1|U|1693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NWW_042 not in the Motif Atlas

Geometric match to HL_4PMI_004

Geometric discrepancy: 0.078

The information below is about HL_4PMI_004

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7NWW|1|1|C|1691
7NWW|1|1|U|1692
7NWW|1|1|U|1693
7NWW|1|1|C|1694
7NWW|1|1|G|1695
7NWW|1|1|G|1696

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain C

50S ribosomal protein L2