HL_7NWW_047

3D structure

PDB id

7NWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

7NWW|1|1|C|1870

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NWW_047 not in the Motif Atlas

Geometric match to HL_3OXE_002

Geometric discrepancy: 0.2342

The information below is about HL_3OXE_002

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

7NWW|1|1|C|1868
7NWW|1|1|G|1869
7NWW|1|1|C|1870
7NWW|1|1|A|1871
7NWW|1|1|A|1872
7NWW|1|1|G|1873

Current chains

Chain 1

23S rRNA

Nearby chains