HL_7O1A_012

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O1A_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.511

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7O1A|1|AA|G|462
7O1A|1|AA|U|463
7O1A|1|AA|U|464
7O1A|1|AA|A|465
7O1A|1|AA|A|466
7O1A|1|AA|U|467
7O1A|1|AA|A|468
7O1A|1|AA|C|469
7O1A|1|AA|C|470

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains