HL_7O1A_033
3D structure
- PDB id
- 7O1A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CAGCCUGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 7O1A|1|B8|C|16, 7O1A|1|B8|G|18, 7O1A|1|B8|G|19, 7O1A|1|B8|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7O1A_033 not in the Motif Atlas
- Homologous match to HL_1QF6_001
- Geometric discrepancy: 0.1174
- The information below is about HL_1QF6_001
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20811.4
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 14
Unit IDs
7O1A|1|B8|C|13
7O1A|1|B8|A|14
7O1A|1|B8|G|15
7O1A|1|B8|C|16
7O1A|1|B8|C|17
7O1A|1|B8|U|17|||A
7O1A|1|B8|G|18
7O1A|1|B8|G|19
7O1A|1|B8|U|20
7O1A|1|B8|A|21
7O1A|1|B8|G|22
Current chains
- Chain B8
- P-site tRNA-Pro
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BF
- 50S ribosomal protein L5
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