HL_7O1A_041

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7O1A|1|BA|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O1A_041 not in the Motif Atlas

Geometric match to HL_5J7L_139

Geometric discrepancy: 0.0986

The information below is about HL_5J7L_139

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7O1A|1|BA|G|194
7O1A|1|BA|A|195
7O1A|1|BA|A|196
7O1A|1|BA|A|197
7O1A|1|BA|C|198
7O1A|1|BA|A|199
7O1A|1|BA|U|200
7O1A|1|BA|C|201

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BL

50S ribosomal protein L15

Chain BX

50S ribosomal protein L28