HL_7O1A_061

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

G(PSU)GCUAACGU

Length

10 nucleotides

Bulged bases

7O1A|1|BA|U|958, 7O1A|1|BA|C|961

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O1A_061 not in the Motif Atlas

Homologous match to HL_5J7L_159

Geometric discrepancy: 0.0886

The information below is about HL_5J7L_159

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7O1A|1|BA|G|954
7O1A|1|BA|PSU|955
7O1A|1|BA|G|956
7O1A|1|BA|C|957
7O1A|1|BA|U|958
7O1A|1|BA|A|959
7O1A|1|BA|A|960
7O1A|1|BA|C|961
7O1A|1|BA|G|962
7O1A|1|BA|U|963

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BM

50S ribosomal protein L16