3D structure

PDB id
7O1A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
GUUAAUAUUC
Length
10 nucleotides
Bulged bases
7O1A|1|BA|U|1396, 7O1A|1|BA|U|1397
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7O1A_070 not in the Motif Atlas
Homologous match to HL_5J7L_168
Geometric discrepancy: 0.0789
The information below is about HL_5J7L_168
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_81545.2
Basepair signature
cWW-tWH-F-F-F-F
Number of instances in this motif group
7

Unit IDs

7O1A|1|BA|G|1389
7O1A|1|BA|U|1390
7O1A|1|BA|U|1391
7O1A|1|BA|A|1392
7O1A|1|BA|A|1393
7O1A|1|BA|U|1394
7O1A|1|BA|A|1395
7O1A|1|BA|U|1396
7O1A|1|BA|U|1397
7O1A|1|BA|C|1398

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

Chain BT
50S ribosomal protein L23

Coloring options:


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