3D structure

PDB id
7O1A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
GAAGACGAC
Length
9 nucleotides
Bulged bases
7O1A|1|BA|A|2820
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7O1A_103 not in the Motif Atlas
Homologous match to HL_5J7L_201
Geometric discrepancy: 0.0614
The information below is about HL_5J7L_201
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_64690.6
Basepair signature
cWW-cSW-F-F-F-F
Number of instances in this motif group
9

Unit IDs

7O1A|1|BA|G|2819
7O1A|1|BA|A|2820
7O1A|1|BA|A|2821
7O1A|1|BA|G|2822
7O1A|1|BA|A|2823
7O1A|1|BA|C|2824
7O1A|1|BA|G|2825
7O1A|1|BA|A|2826
7O1A|1|BA|C|2827

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

Chain BD
50S ribosomal protein L3
Chain BN
50S ribosomal protein L17

Coloring options:


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