HL_7O1C_020

3D structure

PDB id

7O1C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O1C_020 not in the Motif Atlas

Homologous match to HL_4LFB_020

Geometric discrepancy: 0.0727

The information below is about HL_4LFB_020

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7O1C|1|AA|C|897
7O1C|1|AA|G|898
7O1C|1|AA|C|899
7O1C|1|AA|A|900
7O1C|1|AA|A|901
7O1C|1|AA|G|902

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain BA

Large subunit ribosomal RNA; LSU rRNA