HL_7O1C_026

3D structure

PDB id

7O1C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

7O1C|1|AA|C|1136, 7O1C|1|AA|G|1139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O1C_026 not in the Motif Atlas

Homologous match to HL_4LFB_026

Geometric discrepancy: 0.3079

The information below is about HL_4LFB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92935.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

5

Unit IDs

7O1C|1|AA|G|1134
7O1C|1|AA|U|1135
7O1C|1|AA|C|1136
7O1C|1|AA|C|1137
7O1C|1|AA|G|1138
7O1C|1|AA|G|1139
7O1C|1|AA|C|1140

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AI

30S ribosomal protein S9