HL_7O5B_006
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- GGUAACGGC
- Length
- 9 nucleotides
- Bulged bases
- 7O5B|1|A|U|269, 7O5B|1|A|G|274
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7O5B_006 not in the Motif Atlas
- Geometric match to HL_4YAZ_004
- Geometric discrepancy: 0.1932
- The information below is about HL_4YAZ_004
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_90436.4
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 48
Unit IDs
7O5B|1|A|G|267
7O5B|1|A|G|268
7O5B|1|A|U|269
7O5B|1|A|A|270
7O5B|1|A|A|271
7O5B|1|A|C|272
7O5B|1|A|G|273
7O5B|1|A|G|274
7O5B|1|A|C|275
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain Q
- 30S ribosomal protein S17
- Chain T
- 30S ribosomal protein S20
Coloring options: