HL_7O5B_061
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- CGUUGAAAAG
- Length
- 10 nucleotides
- Bulged bases
- 7O5B|1|X|U|794, 7O5B|1|X|A|798, 7O5B|1|X|A|799
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7O5B_061 not in the Motif Atlas
- Homologous match to HL_4WF9_023
- Geometric discrepancy: 0.1155
- The information below is about HL_4WF9_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.2
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 12
Unit IDs
7O5B|1|X|C|791
7O5B|1|X|G|792
7O5B|1|X|U|793
7O5B|1|X|U|794
7O5B|1|X|G|795
7O5B|1|X|A|796
7O5B|1|X|A|797
7O5B|1|X|A|798
7O5B|1|X|A|799
7O5B|1|X|G|800
Current chains
- Chain X
- 23S rRNA (2887-MER)
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain 2
- 50S ribosomal protein L34
- Chain a
- 50S ribosomal protein L3
- Chain h
- MifM-stalling construct
- Chain r
- 50S ribosomal protein L22
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