HL_7O81_006
3D structure
- PDB id
- 7O81 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCUCCGUG
- Length
- 8 nucleotides
- Bulged bases
- 7O81|1|A2|U|329
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7O81|1|A2|C|323
7O81|1|A2|C|324
7O81|1|A2|U|325
7O81|1|A2|C|326
7O81|1|A2|C|327
7O81|1|A2|G|328
7O81|1|A2|U|329
7O81|1|A2|G|330
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain Af
- 40S ribosomal protein S6
- Chain BW
- eL24
Coloring options: