HL_7O81_031
3D structure
- PDB id
- 7O81 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAUUGCAAUUAU(PSU)C
- Length
- 14 nucleotides
- Bulged bases
- 7O81|1|A2|U|1622, 7O81|1|A2|U|1623, 7O81|1|A2|A|1624
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7O81|1|A2|G|1614
7O81|1|A2|A|1615
7O81|1|A2|U|1616
7O81|1|A2|U|1617
7O81|1|A2|G|1618
7O81|1|A2|C|1619
7O81|1|A2|A|1620
7O81|1|A2|A|1621
7O81|1|A2|U|1622
7O81|1|A2|U|1623
7O81|1|A2|A|1624
7O81|1|A2|U|1625
7O81|1|A2|PSU|1626
7O81|1|A2|C|1627
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AG
- uS14
- Chain Ao
- 40S ribosomal protein uS19
- Chain Ar
- 40S ribosomal protein S18
- Chain As
- Ribosomal protein eS19
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