HL_7O81_053
3D structure
- PDB id
- 7O81 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUCCGC
- Length
- 6 nucleotides
- Bulged bases
- 7O81|1|B5|C|775
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7O81_053 not in the Motif Atlas
- Geometric match to HL_4LFB_009
- Geometric discrepancy: 0.1237
- The information below is about HL_4LFB_009
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_34617.5
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 57
Unit IDs
7O81|1|B5|G|773
7O81|1|B5|U|774
7O81|1|B5|C|775
7O81|1|B5|C|776
7O81|1|B5|G|777
7O81|1|B5|C|778
Current chains
- Chain B5
- 28S rRNA
Nearby chains
No other chains within 10ÅColoring options: