HL_7O9K_007

3D structure

PDB id

7O9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-Tu

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAAAAGA

Length

7 nucleotides

Bulged bases

7O9K|1|A|G|1939

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O9K_007 not in the Motif Atlas

Geometric match to HL_4V9F_025

Geometric discrepancy: 0.2549

The information below is about HL_4V9F_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92935.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

5

Unit IDs

7O9K|1|A|U|1934
7O9K|1|A|A|1935
7O9K|1|A|A|1936
7O9K|1|A|A|1937
7O9K|1|A|A|1938
7O9K|1|A|G|1939
7O9K|1|A|A|1940

Current chains

Chain A

16S rRNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain C

Mitochondrial ribosome-associated GTPase 1

Chain D

39S ribosomal protein L2, mitochondrial