3D structure

PDB id
7O9M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU module
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
GAUACACUGAAC
Length
12 nucleotides
Bulged bases
7O9M|1|A|A|2356, 7O9M|1|A|A|2363
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7O9M|1|A|G|2349
7O9M|1|A|A|2350
7O9M|1|A|U|2351
7O9M|1|A|A|2356
7O9M|1|A|C|2357
7O9M|1|A|A|2358
7O9M|1|A|C|2359
7O9M|1|A|U|2360
7O9M|1|A|G|2361
7O9M|1|A|A|2362
7O9M|1|A|A|2363
7O9M|1|A|C|2364

Current chains

Chain A
16S rRNA

Nearby chains

Chain O
39S ribosomal protein L17, mitochondrial
Chain T
39S ribosomal protein L22, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain d
39S ribosomal protein L45, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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