HL_7O9M_023

3D structure

PDB id

7O9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU module

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UUAAAUA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O9M_023 not in the Motif Atlas

Geometric match to HL_4WF9_060

Geometric discrepancy: 0.3636

The information below is about HL_4WF9_060

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7O9M|1|A|U|2613
7O9M|1|A|U|2614
7O9M|1|A|A|2615
7O9M|1|A|A|2616
7O9M|1|A|A|2617
7O9M|1|A|U|2618
7O9M|1|A|A|2619

Current chains

Chain A

16S rRNA

Nearby chains

Chain A2

Transcription termination factor 4, mitochondrial