HL_7ODE_024

3D structure

PDB id

7ODE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome LiCl core particle

Experimental method

ELECTRON MICROSCOPY

Resolution

2.84 Å

Loop

Sequence

GGGAUGUAACGGGGC

Length

15 nucleotides

Bulged bases

7ODE|1|I|U|1130

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ODE|1|I|G|1024
7ODE|1|I|G|1025
7ODE|1|I|G|1026
7ODE|1|I|A|1027
7ODE|1|I|U|1130
7ODE|1|I|G|1131
7ODE|1|I|U|1132
7ODE|1|I|A|1133
7ODE|1|I|A|1134
7ODE|1|I|C|1135
7ODE|1|I|G|1136
7ODE|1|I|G|1137
7ODE|1|I|G|1138
7ODE|1|I|G|1139
7ODE|1|I|C|1140

Current chains

Chain I

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L3

Chain R

50S ribosomal protein L13