3D structure

PDB id
7ODR (explore in PDB, NAKB, or RNA 3D Hub)
Description
State A of the human mitoribosomal large subunit assembly intermediate
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
AGCGUUCAAGCU
Length
12 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ODR|1|A|A|2200
7ODR|1|A|G|2201
7ODR|1|A|C|2202
7ODR|1|A|G|2203
7ODR|1|A|U|2204
7ODR|1|A|U|2205
7ODR|1|A|C|2206
7ODR|1|A|A|2207
7ODR|1|A|A|2208
7ODR|1|A|G|2209
7ODR|1|A|C|2210
7ODR|1|A|U|2211

Current chains

Chain A
16S mitochondrial rRNA, DNA (31-MER),16S mitochondrial rRNA

Nearby chains

Chain 4
39S ribosomal protein L36, mitochondrial
Chain J
39S ribosomal protein L11, mitochondrial
Chain k
39S ribosomal protein L53, mitochondrial
Chain l
39S ribosomal protein L54, mitochondrial

Coloring options:

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