3D structure

PDB id
7ODS (explore in PDB, NAKB, or RNA 3D Hub)
Description
State B of the human mitoribosomal large subunit assembly intermediate
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
AACCCUCUAAAU
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ODS|1|A|A|2064
7ODS|1|A|A|2065
7ODS|1|A|C|2066
7ODS|1|A|C|2067
7ODS|1|A|C|2068
7ODS|1|A|U|2069
7ODS|1|A|C|2070
7ODS|1|A|U|2071
7ODS|1|A|A|2072
7ODS|1|A|A|2073
7ODS|1|A|A|2074
7ODS|1|A|U|2075

Current chains

Chain A
16S mitochondrial rRNA, DNA (30-MER),16S mitochondrial rRNA

Nearby chains

Chain 6
39S ribosomal protein L38, mitochondrial
Chain N
39S ribosomal protein L16, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain Z
39S ribosomal protein L30, mitochondrial
Chain f
39S ribosomal protein L48, mitochondrial

Coloring options:

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