HL_7ODS_013
3D structure
- PDB id
- 7ODS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State B of the human mitoribosomal large subunit assembly intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAAAAAC
- Length
- 8 nucleotides
- Bulged bases
- 7ODS|1|A|A|2131
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ODS_013 not in the Motif Atlas
- Homologous match to HL_4WF9_028
- Geometric discrepancy: 0.2092
- The information below is about HL_4WF9_028
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47171.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
7ODS|1|A|G|2129
7ODS|1|A|A|2130
7ODS|1|A|A|2131
7ODS|1|A|A|2132
7ODS|1|A|A|2133
7ODS|1|A|A|2134
7ODS|1|A|A|2135
7ODS|1|A|C|2136
Current chains
- Chain A
- 16S mitochondrial rRNA, DNA (30-MER),16S mitochondrial rRNA
Nearby chains
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain S
- 39S ribosomal protein L21, mitochondrial
- Chain Z
- 39S ribosomal protein L30, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
- Chain r
- 39S ribosomal protein S18a, mitochondrial
Coloring options: