3D structure

PDB id
7OF1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
UGAGUAAAUAUG
Length
12 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OF1|1|1|U|990
7OF1|1|1|G|991
7OF1|1|1|A|992
7OF1|1|1|G|993
7OF1|1|1|U|1052
7OF1|1|1|A|1053
7OF1|1|1|A|1054
7OF1|1|1|A|1055
7OF1|1|1|U|1056
7OF1|1|1|A|1057
7OF1|1|1|U|1058
7OF1|1|1|G|1059

Current chains

Chain 1
25S rRNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain F
60S ribosomal protein L7-A
Chain T
60S ribosomal protein L21-A

Coloring options:

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