HL_7OF1_023

3D structure

PDB id

7OF1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGAGUAAAUAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OF1|1|1|U|990
7OF1|1|1|G|991
7OF1|1|1|A|992
7OF1|1|1|G|993
7OF1|1|1|U|1052
7OF1|1|1|A|1053
7OF1|1|1|A|1054
7OF1|1|1|A|1055
7OF1|1|1|U|1056
7OF1|1|1|A|1057
7OF1|1|1|U|1058
7OF1|1|1|G|1059

Current chains

Chain 1

25S rRNA

Nearby chains

Chain 3

5S ribosomal RNA; 5S rRNA

Chain F

60S ribosomal protein L7-A

Chain T

60S ribosomal protein L21-A