HL_7OF1_045

3D structure

PDB id

7OF1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAC

Length

4 nucleotides

Bulged bases

7OF1|1|1|G|2111

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OF1_045 not in the Motif Atlas

Homologous match to HL_9PN5_043

Geometric discrepancy: 0.3245

The information below is about HL_9PN5_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_17051.1

Basepair signature

cWW-F

Number of instances in this motif group

2

Unit IDs

7OF1|1|1|G|2110
7OF1|1|1|G|2111
7OF1|1|1|A|2113
7OF1|1|1|C|2114

Current chains

Chain 1

25S rRNA

Nearby chains

Chain R

60S ribosomal protein L19-A

Chain u

Ribosome biogenesis protein RLP24