3D structure

PDB id
7OF2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
AGCAGAACCCAACCU
Length
15 nucleotides
Bulged bases
7OF2|1|A|G|2831, 7OF2|1|A|A|2832, 7OF2|1|A|C|2839
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OF2|1|A|A|2827
7OF2|1|A|G|2828
7OF2|1|A|C|2829
7OF2|1|A|A|2830
7OF2|1|A|G|2831
7OF2|1|A|A|2832
7OF2|1|A|A|2833
7OF2|1|A|C|2834
7OF2|1|A|C|2835
7OF2|1|A|C|2836
7OF2|1|A|A|2837
7OF2|1|A|A|2838
7OF2|1|A|C|2839
7OF2|1|A|C|2840
7OF2|1|A|U|2841

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain 6
39S ribosomal protein L38, mitochondrial
Chain N
39S ribosomal protein L16, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain Z
39S ribosomal protein L30, mitochondrial
Chain f
39S ribosomal protein L48, mitochondrial

Coloring options:

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