3D structure

PDB id
7OF3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
AGCAUCACCAGUAUU
Length
15 nucleotides
Bulged bases
7OF3|1|A|U|2522, 7OF3|1|A|C|2523, 7OF3|1|A|A|2527, 7OF3|1|A|U|2531
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OF3|1|A|A|2518
7OF3|1|A|G|2519
7OF3|1|A|C|2520
7OF3|1|A|A|2521
7OF3|1|A|U|2522
7OF3|1|A|C|2523
7OF3|1|A|A|2524
7OF3|1|A|C|2525
7OF3|1|A|C|2526
7OF3|1|A|A|2527
7OF3|1|A|G|2528
7OF3|1|A|U|2529
7OF3|1|A|A|2530
7OF3|1|A|U|2531
7OF3|1|A|U|2532

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial
Chain G
Transcription termination factor 4, mitochondrial

Coloring options:

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