HL_7OF3_025
3D structure
- PDB id
- 7OF3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AAACAACCU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OF3_025 not in the Motif Atlas
- Geometric match to HL_8H1B_001
- Geometric discrepancy: 0.3301
- The information below is about HL_8H1B_001
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_86621.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
7OF3|1|A|A|2753
7OF3|1|A|A|2754
7OF3|1|A|A|2755
7OF3|1|A|C|2756
7OF3|1|A|A|2791
7OF3|1|A|A|2792
7OF3|1|A|C|2793
7OF3|1|A|C|2794
7OF3|1|A|U|2795
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain G
- Transcription termination factor 4, mitochondrial
- Chain H
- 39S ribosomal protein L9, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
Coloring options: