3D structure

PDB id
7OF3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
GCAGAACCCAACC
Length
13 nucleotides
Bulged bases
7OF3|1|A|G|2831, 7OF3|1|A|A|2832
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OF3|1|A|G|2828
7OF3|1|A|C|2829
7OF3|1|A|A|2830
7OF3|1|A|G|2831
7OF3|1|A|A|2832
7OF3|1|A|A|2833
7OF3|1|A|C|2834
7OF3|1|A|C|2835
7OF3|1|A|C|2836
7OF3|1|A|A|2837
7OF3|1|A|A|2838
7OF3|1|A|C|2839
7OF3|1|A|C|2840

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain 6
39S ribosomal protein L38, mitochondrial
Chain N
39S ribosomal protein L16, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain Z
39S ribosomal protein L30, mitochondrial
Chain f
39S ribosomal protein L48, mitochondrial

Coloring options:

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