HL_7OF3_030

3D structure

PDB id

7OF3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AGUCCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OF3_030 not in the Motif Atlas

Homologous match to HL_4WF9_056

Geometric discrepancy: 0.1647

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7OF3|1|A|A|2958
7OF3|1|A|G|2959
7OF3|1|A|U|2960
7OF3|1|A|C|2961
7OF3|1|A|C|2962
7OF3|1|A|A|2963
7OF3|1|A|U|2964
7OF3|1|A|A|2965
7OF3|1|A|U|2966

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain 4

39S ribosomal protein L36, mitochondrial