HL_7OF3_033

3D structure

PDB id

7OF3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AGUAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OF3_033 not in the Motif Atlas

Homologous match to HL_7RQB_063

Geometric discrepancy: 0.1213

The information below is about HL_7RQB_063

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

7OF3|1|A|A|3081
7OF3|1|A|G|3082
7OF3|1|A|U|3083
7OF3|1|A|A|3084
7OF3|1|A|A|3085
7OF3|1|A|U|3086

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial

Chain G

Transcription termination factor 4, mitochondrial