HL_7OF4_033

3D structure

PDB id

7OF4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UU(OMU)(OMG)UUCAA

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OF4_033 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3694

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

7OF4|1|A|U|3037
7OF4|1|A|U|3038
7OF4|1|A|OMU|3039
7OF4|1|A|OMG|3040
7OF4|1|A|U|3041
7OF4|1|A|U|3042
7OF4|1|A|C|3043
7OF4|1|A|A|3044
7OF4|1|A|A|3045

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain C

Putative GTP-binding protein 6

Chain L

39S ribosomal protein L14, mitochondrial