HL_7OF4_036

3D structure

PDB id

7OF4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UCACAA

Length

6 nucleotides

Bulged bases

7OF4|1|A|C|3157

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OF4_036 not in the Motif Atlas

Geometric match to HL_4WRT_001

Geometric discrepancy: 0.1902

The information below is about HL_4WRT_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19413.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

9

Unit IDs

7OF4|1|A|U|3154
7OF4|1|A|C|3155
7OF4|1|A|A|3156
7OF4|1|A|C|3157
7OF4|1|A|A|3158
7OF4|1|A|A|3159

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain E

39S ribosomal protein L3, mitochondrial

Chain L

39S ribosomal protein L14, mitochondrial

Chain O

39S ribosomal protein L17, mitochondrial

Chain Q

39S ribosomal protein L19, mitochondrial