HL_7OF5_025
3D structure
- PDB id
- 7OF5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UG(OMG)GGCG
- Length
- 7 nucleotides
- Bulged bases
- 7OF5|1|A|G|2816
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OF5_025 not in the Motif Atlas
- Geometric match to HL_1WZ2_007
- Geometric discrepancy: 0.1691
- The information below is about HL_1WZ2_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.8
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 23
Unit IDs
7OF5|1|A|U|2813
7OF5|1|A|G|2814
7OF5|1|A|OMG|2815
7OF5|1|A|G|2816
7OF5|1|A|G|2817
7OF5|1|A|C|2818
7OF5|1|A|G|2819
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- 5-methylcytosine rRNA methyltransferase NSUN4
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain x
- Mitochondrial ribosome-associated GTPase 2
Coloring options: