HL_7OF5_032
3D structure
- PDB id
- 7OF5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AGUAAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OF5_032 not in the Motif Atlas
- Homologous match to HL_7RQB_063
- Geometric discrepancy: 0.1194
- The information below is about HL_7RQB_063
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_35490.2
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 299
Unit IDs
7OF5|1|A|A|3081
7OF5|1|A|G|3082
7OF5|1|A|U|3083
7OF5|1|A|A|3084
7OF5|1|A|A|3085
7OF5|1|A|U|3086
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- 5-methylcytosine rRNA methyltransferase NSUN4
- Chain D
- 39S ribosomal protein L2, mitochondrial
- Chain G
- Transcription termination factor 4, mitochondrial
- Chain x
- Mitochondrial ribosome-associated GTPase 2
Coloring options: