HL_7OG4_009

3D structure

PDB id

7OG4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OG4_009 not in the Motif Atlas

Geometric match to HL_4LFB_016

Geometric discrepancy: 0.1595

The information below is about HL_4LFB_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7OG4|1|AA|C|1023
7OG4|1|AA|G|1024
7OG4|1|AA|A|1025
7OG4|1|AA|A|1026
7OG4|1|AA|A|1027
7OG4|1|AA|G|1028

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain AL

28S ribosomal protein S15, mitochondrial

Chain AQ

28S ribosomal protein S21, mitochondrial