HL_7OG4_034

3D structure

PDB id

7OG4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCUAAAAGCAG

Length

11 nucleotides

Bulged bases

7OG4|1|XA|A|2181

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OG4_034 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.4801

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7OG4|1|XA|C|2175
7OG4|1|XA|C|2176
7OG4|1|XA|U|2177
7OG4|1|XA|A|2178
7OG4|1|XA|A|2179
7OG4|1|XA|A|2180
7OG4|1|XA|A|2181
7OG4|1|XA|G|2182
7OG4|1|XA|C|2183
7OG4|1|XA|A|2184
7OG4|1|XA|G|2185

Current chains

Chain XA

16S mitochondrial rRNA

Nearby chains

Chain XJ

39S ribosomal protein L11, mitochondrial

Chain l

39S ribosomal protein L54, mitochondrial